[Bioc-devel] EpiCompare - Transfer maintainer

2024-10-15 Thread Tom
Hi, I am currently the maintainer of the package EpiCompare, and I would like to transfer maintainership to Hiru Dash (hdash.w...@gmail.com). Hiru should already have a BiocCredentials account, but if there is anything else needed please let me know. Best wishes, Tom [[alternative HTML

Re: [Bioc-devel] Changing the name of a package

2014-09-11 Thread Tom Hardcastle
Hi Dan, Could you rename it to riboSeqR, please? Thanks, Tom On 10/09/14 18:25, Dan Tenenbaum wrote: Hi Thomas, - Original Message - From: "Thomas J Hardcastle" To: bioc-devel@r-project.org Sent: Monday, September 8, 2014 5:19:09 PM Subject: [Bioc-devel] Changing the

Re: [Bioc-devel] Changing the name of a package

2014-09-23 Thread Tom Hardcastle
t the devel repository. Is there something else I need to do to fix this? Thanks, Tom On 11/09/14 18:50, Dan Tenenbaum wrote: - Original Message - From: "Tom Hardcastle" To: "Dan Tenenbaum" Cc: bioc-devel@r-project.org Sent: Thursday, September 11, 2014 3:25

Re: [Bioc-devel] baySeq countData class bug?

2015-02-23 Thread Tom Hardcastle
inging it to my attention. Cheers, Tom On 20/02/15 11:00, bioc-devel-requ...@r-project.org wrote: > Message: 5 > Date: Fri, 20 Feb 2015 11:55:21 +0200 > From: Panagiotis Moulos > To:"bioc-devel@r-project.org" > Subject: [Bioc-devel] baySeq countData class bug? > Message-ID:&

[Bioc-devel] new error when submitting package 'there is no package called 'codetoolsBioC''

2015-06-05 Thread Jennifer Tom
I made minor changes to my package and resubmitted it to Bioconductor. It previously checked without errors. I now get an error message: Failed with error: 'there is no package called 'codetoolsBioC'' and am uncertain how to address this. Any insight appreciated. Thanks! Jen [[alte

Re: [Bioc-devel] new error when submitting package 'there is no package called 'codetoolsBioC''

2015-06-05 Thread Jennifer Tom
Hi Dan, Thank you for your quick response! The package is genotypeeval, Jen On Fri, Jun 5, 2015 at 10:33 AM, Dan Tenenbaum wrote: > > > - Original Message - > > From: "Jennifer Tom" > > To: bioc-devel@r-project.org > > Sent: Friday, June 5, 2015

Re: [Bioc-devel] riboSeqR error - matrix of zeros output from riboSeqR::readingFrame()

2015-10-27 Thread Tom Hardcastle
seems to stem from duplicated headers within the minus_rrna_transcriptome.fa file - this should be corrected in the fasta file. Best wishes, Tom Hardcastle On 27/10/15 11:00, bioc-devel-requ...@r-project.org wrote: Message: 1 Date: Mon, 26 Oct 2015 13:57:15 -0700 From: "Arora, Sonali