[Bioc-devel] Warnings on R CMD check on Mac OS and Linux

2021-03-08 Thread Oluwafemi OLUSOJI via Bioc-devel
Dear All, I get this warning on the latest update of my package. The warning occurs only with Mac and Linux. I am a bit at loss here. These errors don't actually exist because these functions and methods are properly documented. The missing link doesn't even exist anymore. I have rebuilt both the

Re: [Bioc-devel] Warnings on R CMD check on Mac OS and Linux

2021-03-08 Thread Oluwafemi OLUSOJI via Bioc-devel
t; > On 3/8/21, 5:46 PM, "Bioc-devel on behalf of Oluwafemi OLUSOJI via > Bioc-devel" bioc-devel@r-project.org> wrote: > > Dear All, > > I get this warning on the latest update of my package. The warning > occurs > only with Mac and Linux. I am a bit

Re: [Bioc-devel] Warnings on R CMD check on Mac OS and Linux

2021-03-11 Thread Oluwafemi OLUSOJI via Bioc-devel
s symbol (via the export(PhytoFilter) directive in your > NAMESPACE file), you need to provide an alias for it in one of your man > pages. > > Hope this helps, > > H. > > > On 3/8/21 2:45 PM, Oluwafemi OLUSOJI via Bioc-devel wrote: > > Dear All, > > >

Re: [Bioc-devel] Warnings on R CMD check on Mac OS and Linux

2021-03-11 Thread Oluwafemi OLUSOJI via Bioc-devel
> >> here 'R CMD check' is complaining about the lack of an alias for the >> PhytoFilter **object** (which turns out to be a function). Since you >> export this symbol (via the export(PhytoFilter) directive in your >> NAMESPACE file), you need to provide an alias for

[Bioc-devel] Error: Support site registration

2021-04-08 Thread Oluwafemi OLUSOJI via Bioc-devel
Dear All, I just committed some changes to my package, but I get this error about adding package name to watched tags on the support site. How do I fix this? Regards, Daniel * Checking for support site registration... Maintainer is registered at support site. * ERROR: Maintainer must add

[Bioc-devel] Error building on Mac

2021-04-08 Thread Oluwafemi OLUSOJI via Bioc-devel
Dear All, I got this error in the latest build of my package. I think this has to do with Rgraphviz during the test on MacOS. Do I need to do anything about this? Regards, Daniel Quitting from lines 36-43 (cyanoFilter.Rmd) Error: processing vignette 'cyanoFilter.Rmd' failed with diagnostics: pac

[Bioc-devel] Pushing an update to already released package

2021-07-29 Thread Oluwafemi OLUSOJI via Bioc-devel
Hello All, I just pushed an update to the upstream branch of a recently released package (cyanoFilter). I did not get any notification so I am not sure if this was the right thing to do. If not, what am I missing? Regards, Daniel [[alternative HTML version deleted]]