[Bioc-devel] Error in Bioc windows check report

2018-12-31 Thread Benjamin Tremblay
c windows machine. This situation also occurred during package submission (though the errors/warnings were slightly different), but my reviewer OK’d it regardless. At this point, I would like to ask if there is some flaw in my package which I should fix to allow it to pass the check? Or is there a prob

Re: [Bioc-devel] Error in Bioc windows check report

2019-01-03 Thread Benjamin Tremblay
ngSet}; R then does the necessary bookkeeping. > > The error, later, looks like a problem loading 32-bit motifdb; I'm not sure > that I have anything immediately helpful to provide... > > Martin > > > On 12/31/18, 1:30 PM, "Bioc-devel on behalf of Benjamin Trem

[Bioc-devel] R CMD check testthat failure in tokay2 (devel branch)

2019-04-09 Thread Benjamin Tremblay
rt()' for an HTML browser interface to help. Type 'q()' to quit R. > library(testthat) > library(universalmotif) > > test_check("universalmotif") == testthat results === OK: 211 SKIPPED: 1 FAILED: 0 Is there an

Re: [Bioc-devel] R CMD check WARNING file link 'x' in package 'y' does not exist and so has been treated as a topic

2019-04-26 Thread Benjamin Tremblay
like: \link[limma:01Introduction]{limma} Hopefully this works for you. Benjamin Tremblay > Le 26 avr. 2019 à 07:53, Leif Wigge a écrit : > > Dear all, > > I’ve had some trouble clearing the WARNING from R CMD check on tokay2 for my > package piano > (http://bioconductor

[Bioc-devel] LaTeX errors when creating PDF version [tokay1]

2019-06-24 Thread Benjamin Tremblay
-clean` on the test machine and send me the Rd.tex file? I’ve double checked that all my files are pure ASCII. Worst case, I can try removing all accents from my references and hope that was the problem.. Thank you, Benjamin Tremblay ___ Bioc-devel@r