hi, do you know by now when the beta will start? i’m honestly a bit tired of
SVN and would like to participate
Von: "Turaga, Nitesh"
An: bioc-devel@r-project.org
Gesendet: Donnerstag, 1. Juni 2017 14:19:59
Betreff: Re: [Bioc-devel] Git Transition Plan
Hi Nathan,
We¹ve been working on a
Hi!
As I told you at the HCA hackathon, I’m interested in switching over destiny! I
think the class is a really cool idea and seems very well thought out.
Interestingly the design decisions coverged very well with [
https://github.com/theislab/scanpy#readme | scanpy ] ’s [
https://www.pydo
Hi Aaron,
I guess this would be a question for the SummarizedExperiment developers,
though personally, I never liked ExpressionSet's inclination to slap names on
everything.
Too bad we’re bound to SummarizedExperiment’s “rows” and “cols”. Since they
always refer to features and samples
Hi Aaron and Martin,
In any case, a distance matrix calculated from such an array would be fine, as
long as the dimensions are equal to the number of cells. The question is
whether it is needed by enough packages to warrant a slot in the base SCE
class; I will discuss this with Davide and
hi, sadly my duplicate commits are authored by Herve Pages and already in the
repo , so i can’t work at all on my package (destiny).
$ git push
Zähle Objekte: 12, Fertig.
Delta compression using up to 8 threads.
Komprimiere Objekte: 100% (12/12), Fertig.
Schreibe Objekte: 100% (12/12), 1.14
se try again.
Best,
Nitesh
> On Aug 30, 2017, at 4:33 AM, Angerer, Philipp
> wrote:
>
> hi, sadly my duplicate commits are authored by Herve Pages and already in the
> repo, so i can’t work at all on my package (destiny).
>
> $ git push
> Zähle Objekte:
Dear BioConductor maintainers,
The buildbots almost seem able to build my package’s vignettes again, but the
jupyter installation on merida1 still [
http://bioconductor.org/checkResults/release/bioc-LATEST/destiny/merida1-buildsrc.html
| doesn’t seem quite right ] :
* creating vignettes ..
Dear maintainers,
Is there any progress with this? Any way I can help?
Thank you,
Philipp
- Ursprüngliche Mail -
Von: "Philipp Angerer"
An: "bioc-devel"
Gesendet: Mittwoch, 4. Dezember 2019 10:58:44
Betreff: [Bioc-devel] jupyter installation on merida1
Dear BioConductor maintainers,
Hi,
destiny ’s git mirror has been out of sync for quite some time.
The currently latest SVN revision has bumped the version to 1.3.4 , but git
master is still on 1.3.0 .
Thanks for looking at it,
Philipp
Helmholtz Zentrum Muenchen
Deutsches Forschungszentrum fuer Gesundheit und Umwe
great, thanks!
Von: "Martin Morgan"
An: "Angerer, Philipp" , "bioc-devel"
Gesendet: Donnerstag, 11. August 2016 12:54:50
Betreff: Re: [Bioc-devel] Git mirror out of sync
On 08/09/2016 04:18 AM, Angerer, Philipp via Bioc-devel wrote:
> Hi,
>
>
hi, it happened
again:https://github.com/Bioconductor-mirror/destinyout of
sync…
Von: "Angerer, Philipp via Bioc-devel"
An: "Martin Morgan"
CC: "bioc-devel"
Gesendet: Donnerstag, 11. August 2016 13:05:58
Betreff: Re: [Bioc-devel] Git mirror out of sync
Hi,
Looking at my package’s build report, the devel version isn’t built anymore on
windows:
http://bioconductor.org/checkResults/devel/bioc-LATEST/destiny/tokay1-buildsrc.html
The release version is built just fine with moscato2:
http://bioconductor.org/checkResults/release/bioc-LATEST/dest
Although, since you (Philipp) are the maintainer of the nbconvertR package, you
may want to create an INSTALL file in that package. It's up to you.
Dan
Haha, yeah. Thanks, Dan!
I’m already in the process of submitting nbconvertR 1.1, which only uses
jupyter (Using ipython nbconvert is
hi,
for my package “destiny”, the master and release-3.4 branches aren’t in sync
between SVN and the gihub mirror.
release-3.4 is just 2 commits behind, but the master branch has diverged. (a
few commits have different hashs and a few are missing on the github mirror)
this has been really u
: "Angerer, Philipp" , "bioc-devel"
Gesendet: Mittwoch, 14. Dezember 2016 16:02:04
Betreff: Re: [Bioc-devel] destiny git mirror and SVN desynced
On 12/14/2016 09:27 AM, Angerer, Philipp via Bioc-devel wrote:
> hi,
>
> for my package “destiny”, the master
15 matches
Mail list logo
