Hi,
I am developing a package called ComplexHeatmap and re-format the vignettes
recently. I deleted the old vignettes and created several new vignettes.
But when I look at the web page of the package (
http://bioconductor.org/packages/devel/bioc/html/ComplexHeatmap.html), the
old vignette files (t
ate in the repo (which I assume is also
> when the splash-pages are updated) upon version bump.
>
> ~G
>
> On Tue, Nov 17, 2015 at 4:35 AM, 顾祖光 wrote:
>
>> Hi,
>>
>> I am developing a package called ComplexHeatmap and re-format the
>> vignettes
>>
; >
> > > I'm not sure why the vignettes are still there on the devel landing
> page
> > if
> > > you have in fact bumped the package version in svn though. That likely
> > > comes down to exactly how those splash pages are generated, which I
> don't
&
Dear Bioconductor,
I submitted a package "simplifyEnrichment" ten days ago, but the status of
the submission is still "awaiting moderation" and has not been changed yet.
I want to ask is there anything I missed or I just wait?
The link for the submission is
https://github.com/Bioconductor/Contrib
I guess it is mainly due to figures in the vignettes. Maybe you can use a
smaller figure size, e.g. by setting `fig.width` in the vignettes?
On Wed, 3 Mar 2021 at 13:50, Fabricio de Almeida <
fabricio_almeidasi...@hotmail.com> wrote:
> Sorry, I accidentally sent the incomplete email.
>
> With Bio
Hi all,
I have a package `pkgndep` (
https://cran.r-project.org/web/packages/pkgndep/index.html) which can make
a dependency heatmap for a specific package. As shown in the following
figure for minfi package (version 1.30.0)
https://jokergoo.github.io/pkgndep/stat/image/minfi.png
Rows are the pa
Hi David,
My experience is to put those packages that are necessary for the "core
analysis" in your package to Depends/Imports and put those packages that
are only needed for the "additional analysis" in your package to Suggests.
Then in the function which needs these "suggested packages", you can
An analysis with the pkgndep package (https://github.com/jokergoo/pkgndep)
shows
the three heaviest packages are RCy3, clusterExperiment and netSmooth. If
you can
move these three packages to SUGGESTS (where the packages are loaded only
when related
functions are called), I think the number of depe
