Re: [Bioc-devel] Bioconductor archive?

2025-03-19 Thread LluĂ­s Revilla
Hi Lori, Many thanks for your answer. I have a couple of follow-up questions. > It looks like the Date/Publication field is only present when there was a > change on the branch post release. (ie. any package that has a version > x.y.(z+n) instead of x.y.0. > After a release is frozen and a ne

Re: [Bioc-devel] Bioconductor archive?

2025-03-19 Thread Sean Davis
Hi, all. Perhaps a bit tangential, but I capture the results of all build reports for all packages daily (that is the intent, anyway) going back a year or so (a couple of years if we dig into archives). The reports are processed using code in this repo: https://github.com/seandavi/BiocBuildDB u

Re: [Bioc-devel] failing with non-reproducible error "no slot of name "name" for this object of class "pEdge"" from Rgraphviz

2025-03-19 Thread Ramon Diaz-Uriarte
Dear Kasper and Robert, Regarding the "no slot of name "name" for this object of class "pEdge"" error, the interesting thing is that: a) this is happening for the mentioned packages - OncoSimulR: https://bioconductor.org/checkResults/3.21/bioc-LATEST/OncoSimulR/kunpeng2-buildsrc.html

Re: [Bioc-devel] failing with non-reproducible error "no slot of name "name" for this object of class "pEdge"" from Rgraphviz

2025-03-19 Thread Robert Castelo via Bioc-devel
Hi Kasper, this is really confusing, yesterday I saw a build with timestamp of Monday 17th, where the buffer overflow error was gone, so sadly, we're back to square one with this problem. I'll try to dig a bit more, good luck with buildEdgeList(). robert. On 3/18/25 20:01, Kasper Daniel Hanse

Re: [Bioc-devel] failing with non-reproducible error "no slot of name "name" for this object of class "pEdge"" from Rgraphviz

2025-03-19 Thread Luca Lepore via Bioc-devel
Dear all, Sorry to bother you. I would like to know how to be removed from these mailing lists. I made the subscription just for a university project and now I would like to unsubscribe. I sent an email to bioc-devel-ow...@r-project.org two months ago, but I'm still receiving email. I'm writi