exomePeak2 was never deprecated.
You can push to the devel branch to also fix the package in devel and then it
will be available
https://bioconductor.org/checkResults/devel/bioc-LATEST/exomePeak2/
Lori Shepherd - Kern
Bioconductor Core Team
Roswell Park Comprehensive Cancer Center
Departm
I am in the process of refining an R package for submission to Bioconductor. My
package has several non-exported functions that include usage examples wrapped
in "dontrun". I do this because these are functions are only called within a
parent function and require complex and esoteric inputs. It
Not if its justified but I'd be sure to mark the man pages as internal (if
using roxygen you can do @keywords internal) . Normally that is referring to
any exported function. I assume adequate testing, or examples in exported
functions are run?
Lori Shepherd - Kern
Bioconductor Core Team
R
