Re: [Bioc-devel] Trying to fix package failing on 3.17

2022-12-19 Thread Kern, Lori
I can't help much with the segfault As far as installing through Bioconductor. Until the package installs, builds, and checks cleanly it will not be available. The fact that it is not listed on the landing page means that it has not yet build since the release on devel and is not available via

[Bioc-devel] How to deal with external software dependencies

2022-12-19 Thread RAN HU
Hi all, I am developing a new R package that relies on some external software. There are some system calls written in the R function that requires the path to those external software tools. I am not sure what is the best practice to using external software in R Bioconductor packages. If the exter