[Bioc-devel] Build errors when running examples that call circlize

2021-08-03 Thread Giulia Pais
Hope somebody can help with this. I�ve implemented a function in the package I�m developing that uses circlize. The function simply draws a basic circos plot with genomic densities, nothing fancy. Even if in my local dev environment I have no build issues, the build fails on all platforms when r

Re: [Bioc-devel] EXTERNAL: Build errors when running examples that call circlize

2021-08-03 Thread Marcel Ramos
Hi Giulia, It seems that the issue is further down the callstack, likely in circlize. To reproduce, you can enable _R_CHECK_LENGTH_1_* from https://bioconductor.org/checkResults/devel/bioc-LATEST/Renviron.bioc You might have to open an issue at https://github.com/jokergoo/circlize Note. FWIW w

Re: [Bioc-devel] EXTERNAL: Build errors when running examples that call circlize

2021-08-03 Thread Giulia Pais
Thanks, I got in contact with the developer of circlize, I’ll temporarily resort to \dontrun until the problem is fixed. Best, Giulia From: Bioc-devel on behalf of Marcel Ramos Date: Tuesday, August 3, 2021 at 15:50 To: bioc-devel@r-project.org Subject: Re: [Bioc-devel] EXTERNAL: Build errors

[Bioc-devel] Git force push for scAnnotatR - Complete

2021-08-03 Thread Johannes Griss
Hi Nitesh, As we discussed, thanks a lot for doing the update on the Bioconductor Git server! Everything's working perfectly again. Kind regards, Johannes ___ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel