Re: [Bioc-devel] Usage of donttest{} in examples

We will look into the calculations for percentage to see if there is a bug in the reporting. We encourage all functions to be adequately testing and run in actively executed code. Is it possible to scale down the example data set? Often times it is feasible to show functionality of a function

[Bioc-devel] Call for Community Volunteered Package Reviewers

Bioconductor is pleased to announce a call for community volunteers to assist with Bioconductor Package Reviews. This is an excellent way to get involved with and give back to the Bioconductor Community. The minimum requirement to volunteer is to be actively maintaining an existing Bioconductor pa

[Bioc-devel] Getting ready for package submission, running into a couple of errors/warnings that I can't figure out

Good evening all - I'm getting my first package ready for submission to Bioconductor, and I'm running into a couple of errors/warnings when I run R CMD CHECK or BiocCheck. All of my current troubleshooting on these errors has come up blank, so I'm hoping someone here can point me in the right di

[Bioc-devel] reacVcf(remoteFile, "hg19", region) fails in VariantAnnotation 1.39.0 (and friends), works with 1.38.0

The problem is described in full here, with 4 lines of code to reproduce. https://support.bioconductor.org/p/9138262/ James MacDonald pointed out that my initial analysis is wrong. (Thank you, Jim!) I claimed this works on macOS, fails on linu

Re: [Bioc-devel] Getting ready for package submission, running into a couple of errors/warnings that I can't figure out

Hi, I will try to answer a couple of the questions you asked. I am not able to help with your question on ‘qpdf'. > On Jul 12, 2021, at 5:58 PM, Wight, Andrew E. > wrote: > > Good evening all - I'm getting my first package ready for submission to > Bioconductor, and I'm running into a coupl