The appropriate place for the this question is the support site; no need
to cross-post https://support.bioconductor.org/p/79460/
Martin
On 03/09/2016 11:22 PM, huizhu.gmail wrote:
Dear all,
When I run "makeTxDbFromGFF", I got the error message ... Error in
get(name, envir = asNamespace(pkg
Hi all,
I'm trying to update the devel branch of my package following the
instruction found in https://bioconductor.org/developers/how-to/git-mirrors/
.
The repo of my project is: https://github.com/BIMIB-DISCo/TRONCO
>From devel I've first tried to do a git merge master, with no results. I've
th
- Original Message -
> From: "Luca De Sano"
> To: "bioc-devel"
> Sent: Thursday, March 10, 2016 3:22:14 AM
> Subject: [Bioc-devel] Your branch and 'bioc/master' have diverged
> Hi all,
> I'm trying to update the devel branch of my package following the
> instruction found in https://bi
On 10 March 2016 at 18:17, Dan Tenenbaum wrote:
>
>
> - Original Message -
> > From: "Luca De Sano"
> > To: "bioc-devel"
> > Sent: Thursday, March 10, 2016 3:22:14 AM
> > Subject: [Bioc-devel] Your branch and 'bioc/master' have diverged
>
> > Hi all,
> > I'm trying to update the devel b
- Original Message -
> From: "Luca De Sano"
> To: "Dan Tenenbaum"
> Cc: "bioc-devel"
> Sent: Thursday, March 10, 2016 10:21:38 AM
> Subject: Re: [Bioc-devel] Your branch and 'bioc/master' have diverged
> On 10 March 2016 at 18:17, Dan Tenenbaum wrote:
>
>>
>>
>> - Original Messa
Dear all,
There have been some substantial changes in Rstudio's DT package
recently [1], in particular with respect to selecting rows in a
table. One problem is that these updates currently only live on github
(version 0.1.45) while CRAN is stuck at version 0.1 since September
2015. This has been
Laurent,
I'd argue quite strongly against this from a systems perspective. Your
package wouldn't be installable via biocLite. That function can see github
repos, but only when told to and not as dependencies AFAIK. A package
passing but being uninstsllable would be a Very Bad Thing (tm) IMHO.
You
On 11 March 2016 00:41, Gabe Becker wrote:
> Laurent,
>
> I'd argue quite strongly against this from a systems perspective. Your
> package wouldn't be installable via biocLite. That function can see github
> repos, but only when told to and not as dependencies AFAIK. A package
> passing but being
- Original Message -
> From: "Laurent Gatto"
> To: "Gabe Becker"
> Cc: "Lisa Breckels" , "bioc-devel"
> Sent: Thursday, March 10, 2016 4:59:55 PM
> Subject: Re: [Bioc-devel] DT CRAN vs github versions
> On 11 March 2016 00:41, Gabe Becker wrote:
>
>> Laurent,
>>
>> I'd argue quite st
Dear Bioconductor Team,
I got the following BUILD error on moscato2 (demo example in my vignette
suggesting the 'xcms' package):
Error: processing vignette 'ropls.Rnw' failed with diagnostics:
chunk 27
Error : package 'xcms' is not installed for 'arch = x64'
Execution halted
How shall I proceed
- Original Message -
> From: "THEVENOT Etienne 207099"
> To: "bioc-devel"
> Sent: Thursday, March 10, 2016 10:57:05 PM
> Subject: [Bioc-devel] BUILD error on moscato2: package not installed for
> 'arch=x64'
> Dear Bioconductor Team,
>
> I got the following BUILD error on moscato
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