[Bioc-devel] rownames in SummerizedExperiments

2014-04-05 Thread Simon Anders
Hi Martin et al. When I use "mcols" on a SummerizedExperiment object, I get a DataFrame with the row metadata, but without rownames. This is quite annoying if I want to select specific rows using my feature identifiers. Would it be possible to change that? Simon Demonstration of the issue:

Re: [Bioc-devel] rownames in SummerizedExperiments

2014-04-05 Thread Simon Anders
Hi On 05/04/14 17:39, Simon Anders wrote: > When I use "mcols" on a SummerizedExperiment object, I get a DataFrame > with the row metadata, but without rownames. This is quite annoying if I > want to select specific rows using my feature identifiers. Okay, I should have read the help page for "mc

Re: [Bioc-devel] unexpected build and check error

2014-04-05 Thread Martin Morgan
On 04/04/2014 10:36 AM, Luo Weijun wrote: Dan, Thanks for the followup. That’s wired. I use R 3.0.0 here. It is different from R-3.1.0, but I don’t think it would make such a difference in generating the error below: Error in bods[idx, "id.type"] : subscript out of bounds I run the exact same