Re: [Bioc-devel] workflows running Bioc-devel

2016-02-28 Thread Aaron Lun
n" >> Cc: "bioc-devel" >> Sent: Sunday, February 28, 2016 5:59:41 AM >> Subject: Re: [Bioc-devel] workflows running Bioc-devel >> +1 >> >> I'm also interested in having the option of devel / release workflow >> branches for the reasons Aar

Re: [Bioc-devel] workflows running Bioc-devel

2016-02-28 Thread Dan Tenenbaum
c-devel" > Sent: Sunday, February 28, 2016 5:59:41 AM > Subject: Re: [Bioc-devel] workflows running Bioc-devel > +1 > > I'm also interested in having the option of devel / release workflow > branches for the reasons Aaron mentions. > > I develop software and

Re: [Bioc-devel] workflows running Bioc-devel

2016-02-28 Thread Michael Love
+1 I'm also interested in having the option of devel / release workflow branches for the reasons Aaron mentions. I develop software and workflow in tandem but currently there is a disconnect in showing publicly how software changes will impact a workflow. [[alternative HTML version delet

Re: [Bioc-devel] workflows running Bioc-devel

2016-02-28 Thread Aaron Lun
Hi all, Is it possible to get the workflow build system to use an R installation running Bioc-devel for a specific workflow? To give some context, I've been writing a workflow for low-level analysis of single-cell RNA-seq data. Of the many Bioconductor packages it uses, one of them is my own