Hi Leo,
many thanks for getting back to me!
Regarding cross-references: the format wraps around bookdown so the \@ref()
syntax is supported in the same way as in other BiocStyle format functions
and in BiocWorkflowTools::f1000research.
As for the Mac builder issue, the libraries are:
> openssl
Hi Andrzej,
Thank you for replies and looking into this!
Thank you for the detailed explanation about the beta workflow build
system and the use of rmarkdown::render with a custom template. Does
it support \@ref() calls?
Now that the Windows build is solved, I believe that the Mac one is
related
I've updated pandoc on the win workflow builder to the latest release
(1.19.2.1) which resolves the vignette compilation error there.
Regarding the Mac builder the workflow fails in the call to
derfinder::loadCoverage issued by the line
regions <- expressed_regions("SRP045638", "chr21", cutoff =
Hi Leo,
first of all, many thanks for your efforts in troubleshooting workflow
build issues and the detailed description of your findings. Also,
congratulations on the successful publication of your new workflow on the
Bioconductor website!
We are now beta testing a new workflow build engine whic
