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> Cc: bioc-devel; James W. MacDonald
> Subject: Re: [Bioc-devel] topGO and cat() and print() statements in program
> code
>
> I did replace the call to cat in topGO with with a call to a package
> private .cat2message function (which makes some adjustments to the
>
; James W. MacDonald
Subject: Re: [Bioc-devel] topGO and cat() and print() statements in program
code
I did replace the call to cat in topGO with with a call to a package
private .cat2message function (which makes some adjustments to the
passed arguments so that the messages look as before). The
to do nothing:
>>
>> cat <- function() {}
>>
>> Dan
>>
>>
>> - Original Message -
>>> From: "James W. MacDonald"
>>> To: "Witold E Wolski"
>>> Cc: "bioc-devel"
>>> Sent: Tuesd
"
>> Sent: Tuesday, February 2, 2016 6:50:21 AM
>> Subject: Re: [Bioc-devel] topGO and cat() and print() statements in program
>> code
>
>> I can't speak to the issue of changing somebody else's code without forking
>> (which you are free to do), o
Dear Martin,
That's great that you can update the svn and are willing to do so. I
will go with the github mirror, fork it, make the changes and send you
a link to the fork as soon as I am done replacing the cat with
message. I will try to be done sometimes next week.
best
Would it not be more co
Another dirty hack is to redefine cat() in your own code to do nothing:
cat <- function() {}
Dan
- Original Message -
> From: "James W. MacDonald"
> To: "Witold E Wolski"
> Cc: "bioc-devel"
> Sent: Tuesday, February 2, 2016 6:50:21
Hi Witold -- if you'd like to submit a patch, I will apply this to the package
and notify the maintainer. I suggest you either use svn to check out the
'devel' version of the package, make your changes, and forward to me
(martin.morgan at roswellpark.org) the output of svn diff (basic instructio
I can't speak to the issue of changing somebody else's code without forking
(which you are free to do), or getting their OK. But do note that there are
usually ways around this. First, you can use include = FALSE in your chunk
options statement, which will run all the code, but silence everything.
