The latest build of simpleSingleCell (Build #48: Jun 20, 2017 5:37:13
AM) is failing because GenomicFeatures can't be loaded. GenomicFeatures
broke because of the new versions of DBI and RSQLite released over the
past week. Herve and I are working on fixing up GenomicFeatures and once
that's done I
Hi all,
I had this same issue a few months ago (in the weeks leading up to the
release of R-3.4.0), when building an Rmarkdown website on my own laptop.
It seemed the session variables were cleaned up between markdown documents,
but that packages remained loaded and accumulated to the point that I
Thanks for the report Aaron. I'll take a look.
Valerie
On 06/20/2017 07:10 AM, Aaron Lun wrote:
> Hi all,
>
>
> I'm getting a curious error in the Jenkins log when I try to build the
> singleCellWorkflow:
>
>
> http://docbuilder.bioconductor.org:8080/job/simpleSingleCell/48/label=master/console
Hi Aaron,
you may try to manually run a garbage collection on the DLLs
gcDLLs()
?gcDLLs
Federico
On 20 June 2017 at 15:09, Aaron Lun wrote:
> Hi all,
>
>
> I'm getting a curious error in the Jenkins log when I try to build the
> singleCellWorkflow:
>
>
> http://docbuilder.bioconductor.org:8080
Hi all,
I'm getting a curious error in the Jenkins log when I try to build the
singleCellWorkflow:
http://docbuilder.bioconductor.org:8080/job/simpleSingleCell/48/label=master/console
The key part is at the bottom:
Error: package or namespace load failed for 'GenomicFeatures' in dyn.load(f
