Re: [Bioc-devel] range-directed metadata management

2014-07-10 Thread Vincent Carey
On Thu, Jul 10, 2014 at 7:05 PM, Michael Lawrence wrote: > > > > On Thu, Jul 10, 2014 at 2:16 PM, Steve Lianoglou > wrote: > >> Hi, >> >> On Thu, Jul 10, 2014 at 1:52 PM, Vincent Carey >> wrote: >> > a new, more inclusive GWAS catalog is available (GRASP, from Andrew >> Johnson >> > at NHLBI),

Re: [Bioc-devel] range-directed metadata management

2014-07-10 Thread Michael Lawrence
On Thu, Jul 10, 2014 at 2:16 PM, Steve Lianoglou wrote: > Hi, > > On Thu, Jul 10, 2014 at 1:52 PM, Vincent Carey > wrote: > > a new, more inclusive GWAS catalog is available (GRASP, from Andrew > Johnson > > at NHLBI), with 6 million records and voluminous metadata (though it > seems > > sparse

Re: [Bioc-devel] range-directed metadata management

2014-07-10 Thread Steve Lianoglou
Hi, On Thu, Jul 10, 2014 at 1:52 PM, Vincent Carey wrote: > a new, more inclusive GWAS catalog is available (GRASP, from Andrew Johnson > at NHLBI), with 6 million records and voluminous metadata (though it seems > sparse and perhaps can be trimmed/reshaped) > > i made a GRanges and it takes 3 mi