Re: [Bioc-devel] keys function of org.Pf.plasmo.db gives an error.

2015-03-18 Thread Marc Carlson
Ok I spoke a little too quickly earlier. Looking back, there should indeed be a field from columns() called 'ORF' and it is basically used here as the central gene ID for this single package. But the code for keys (and columns) was getting this 'ORF' conflated with the other 'ORF' used in resour

Re: [Bioc-devel] keys function of org.Pf.plasmo.db gives an error.

2015-03-18 Thread Marc Carlson
Hi Paolo, The ORF type has never been available for that package. This is a bug in the columns method (which I will now fix). Thanks for reporting it. Marc On 03/18/2015 03:00 AM, Paolo Martini wrote: Dear Bioconductor, I am working with the annotation package "org.Pf.plasmo.db". I tr