Re: [Bioc-devel] git transition for projects with prior git history

2017-08-11 Thread Turaga, Nitesh
The SVN repo is the most current version of your package as far as Bioconductor goes. Unfortunately, you have totally unrelated histories by the looks of it. (This should show up as an error, when you try to “merge”, i.e `git merge upstream/master`) I would suggest moving forward with the new g

Re: [Bioc-devel] git transition for projects with prior git history

2017-08-10 Thread Turaga, Nitesh
The SVN repo is the most current version of your package as far as Bioconductor goes. Unfortunately, you have totally unrelated histories by the looks of it. I would suggest moving forward with the new git repo, after the transition is done on August 16th. I would not “delete” the repository yo

Re: [Bioc-devel] git transition for projects with prior git history

2017-08-10 Thread Stephanie M. Gogarten
I tried following the instructions in scenario 9 after adding a remote: $ git remote add upstream https://git.bioconductor.org/packages/GENESIS.git $ git fetch --all Fetching origin Fetching upstream warning: no common commits When I merge both upstream and origin, I see all my commits in duplic

Re: [Bioc-devel] git transition for projects with prior git history

2017-08-10 Thread Turaga, Nitesh
suggestion works, but results in > > replaying ~700 commits onto the bioconductor repo...not so nice maybe. > > > > The https://github.com/Bioconductor-mirror/MAST.git repo is to make SVN > > commits from the git tree. > > > > > > > On Jul 28, 2017, a

Re: [Bioc-devel] git transition for projects with prior git history

2017-08-10 Thread Kevin RUE
nto the bioconductor repo...not so nice maybe. > > > > The https://github.com/Bioconductor-mirror/MAST.git repo is to make SVN > commits from the git tree. > > > > > > > On Jul 28, 2017, at 11:33 AM, Turaga, Nitesh > wrote: > > > > > > I would be careful

Re: [Bioc-devel] git transition for projects with prior git history

2017-08-10 Thread Turaga, Nitesh
erence. >> >> Also, i don't understand why you are using the bioconductor-git-mirror? Your >> non-zero commit history should be related to bioconductor git server. >> >> Best >> >> Nitesh >> >> Get Outlook for Android >> >>

Re: [Bioc-devel] git transition for projects with prior git history

2017-08-10 Thread Turaga, Nitesh
; > > Also, i don't understand why you are using the bioconductor-git-mirror? > > Your non-zero commit history should be related to bioconductor git server. > > > > Best > > > > Nitesh > > > > Get Outlook for Android > > > > > > &

Re: [Bioc-devel] git transition for projects with prior git history

2017-08-10 Thread Kevin RUE
or git server. > > > > Best > > > > Nitesh > > > > Get Outlook for Android > > > > > > > > From: Vladimir Kiselev > > Sent: Thursday, July 27, 5:11 PM > > Subject: Re: [Bioc-devel] git transition for projects with prior git > histor

Re: [Bioc-devel] git transition for projects with prior git history

2017-07-28 Thread McDavid, Andrew
-mirror? Your > non-zero commit history should be related to bioconductor git server. > > Best > > Nitesh > > Get Outlook for Android > > > > From: Vladimir Kiselev > Sent: Thursday, July 27, 5:11 PM > Subject: Re: [Bioc-devel] git transition for projects w

Re: [Bioc-devel] git transition for projects with prior git history

2017-07-28 Thread Turaga, Nitesh
k for Android<https://aka.ms/ghei36> From: Vladimir Kiselev Sent: Thursday, July 27, 5:11 PM Subject: Re: [Bioc-devel] git transition for projects with prior git history To: McDavid, Andrew, bioc-devel@r-project.org Hi Andrew, I solved it by just adding '--allow-unrelated-historie

Re: [Bioc-devel] git transition for projects with prior git history

2017-07-27 Thread Vladimir Kiselev
Hi Andrew, I solved it by just adding '--allow-unrelated-histories' to force the merge: https://stackoverflow.com/questions/37937984/git-refusing-to-merge-unrelated-histories Cheers, Vlad On Thu, Jul 27, 2017 at 9:53 PM McDavid, Andrew < andrew_mcda...@urmc.rochester.edu> wrote: > Is there a re