Can you try to add ` fig.retina = NULL` in your `knitr::opts_chunk$set()`
setting?
That helped me to reduce the size of images in image-heavy vignettes.
Source:
http://zevross.com/blog/2017/06/19/tips-and-tricks-for-working-with-images-and-figures-in-r-markdown-documents/#the-fig.retina-argument-
Sorry about that. I had two emails back to back and responded to the wrong one.
Is there a way to create and save and compress the images?
Lori Shepherd - Kern
Bioconductor Core Team
Roswell Park Comprehensive Cancer Center
Department of Biostatistics & Bioinformatics
Elm & Carlton Street
The data is now available in the hub
> query(eh, "TumourMethData")
ExperimentHub with 4 records
# snapshotDate(): 2023-10-06
# $dataprovider: University of California San Francisco, Washington Universi...
# $species: Homo sapiens
# $rdataclass: RangedSummarizedExperiment
# additional mcols(): taxo
