The single package builders for new package submissions are back online.
Thanks for your understanding.
Jennifer Wokaty (they/them)
Waldron Lab at CUNY SPH
Bioconductor Core Team
From: Bioc-devel on behalf of Kern, Lori via
Bioc-devel
Sent: Monday, September 9
Hi Boyi,
This has been resolved in BiocCheck version 1.39.12.
https://github.com/Bioconductor/BiocCheck/issues/205
Best regards,
Marcel
On 1/10/24 2:53 PM, Boyi Guo wrote:
Hi,
I had the same problem (
https://bioconductor.org/spb_reports/tpSVG_buildreport_20240109095309.html).
* Checking fo
; Bioinformatics
Elm & Carlton Streets
Buffalo, New York 14263
From: Boyi Guo
Sent: Wednesday, January 10, 2024 2:53 PM
To: Kern, Lori
Cc: Richard Heery ; bioc-devel@r-project.org
Subject: Re: [Bioc-devel] Single Package Builder failing to detect subscription
Hi,
I had the same problem (
https://bioconductor.org/spb_reports/tpSVG_buildreport_20240109095309.html).
* Checking for bioc-devel mailing list subscription...
> * ERROR: Subscribe to the Bioc-devel mailing list by going to
> https://stat.ethz.ch/mailman/listinfo/bioc-devel
In my experience,
I can confirm that this email is subscribed. We can open an issue on BiocCheck
to investigate this more. In the meantime I will comment on your submission
issue to ignore the error for now.
Lori Shepherd - Kern
Bioconductor Core Team
Roswell Park Comprehensive Cancer Center
Department of
This issue should now be resolved.
Thank you for your patience
Cheers,
Lori Shepherd - Kern
Bioconductor Core Team
Roswell Park Comprehensive Cancer Center
Department of Biostatistics & Bioinformatics
Elm & Carlton Streets
Buffalo, New York 14263
From: Bioc
The updates are complete. The Single Package Builder is now using Bioc 3.15
and R 4.2 for new package submissions.
We have identified a bug in BiocCheck that will cause current packages to fail
in BiocCheckGitClone on the Single Package Builder Report. That looks similar
to the following:
=
We believe this issue has now been resolved. Thank you for your patience.
Lori Shepherd
Bioconductor Core Team
Roswell Park Comprehensive Cancer Center
Department of Biostatistics & Bioinformatics
Elm & Carlton Streets
Buffalo, New York 14263
From: Bioc-dev
Updates are complete. There should be no further interruption
Lori Shepherd
Bioconductor Core Team
Roswell Park Comprehensive Cancer Center
Department of Biostatistics & Bioinformatics
Elm & Carlton Streets
Buffalo, New York 14263
From: Bioc-devel on behal
The single package builder should be back online and available utilizing Bioc
3.10 devel builders.
Thank you for your patience.
Lori Shepherd
Bioconductor Core Team
Roswell Park Cancer Institute
Department of Biostatistics & Bioinformatics
Elm & Carlton Streets
Buffalo, New York 14263
___
The single package builder should now be fixed and produce build reports on
version bumps.
Thank you for your patience.
Lori Shepherd
Bioconductor Core Team
Roswell Park Cancer Institute
Department of Biostatistics & Bioinformatics
Elm & Carlton Streets
Buffalo, New York 14263
__
rk 14263
From: Bioc-devel on behalf of Martin Morgan
Sent: Monday, February 18, 2019 12:30:37 PM
To: Felix Ernst; bioc-devel@r-project.org
Subject: Re: [Bioc-devel] Single Package Builder
Issues with the SPB may persist until Tuesday morning. Martin
On 2/18/19, 5:29 AM, "Bioc-devel on be
Issues with the SPB may persist until Tuesday morning. Martin
On 2/18/19, 5:29 AM, "Bioc-devel on behalf of Felix Ernst"
wrote:
Hi,
I just wanted to ask, whether the SPB is under maintenance.
After a push, the bot reports the start of a build, but th
We are experience some intermittent drops in connectivity and are investigating
this matter. Thanks for pointing these out. We hope to have to issue resolved
shortly.
Lori Shepherd
Bioconductor Core Team
Roswell Park Cancer Institute
Department of Biostatistics & Bioinformatics
Elm & Carl
The single package builder is back on line. Submissions and versions bumps to
new packages submissions should now build and result in a report. We apologize
for the inconvenience.
Thank you for your patience.
Lori Shepherd
Bioconductor Core Team
Roswell Park Cancer Institute
Department o
Testing is complete. The single package builder should be functioning normally
Lori Shepherd
Bioconductor Core Team
Roswell Park Cancer Institute
Department of Biostatistics & Bioinformatics
Elm & Carlton Streets
Buffalo, New York 14263
From: Bioc-devel on
Thank you. Our transitions are complete. New packages will now be built agains
R 3.5 and Bioc 3.7.
Until the CRAN binaries are available for windows we will temporarily not be
building on windows
See related post:
https://stat.ethz.ch/pipermail/bioc-devel/2017-November/012265.html
Lori Sh
The Single Package Builder is now online. Thank you for your patience.
Lori Shepherd
Bioconductor Core Team
Roswell Park Cancer Institute
Department of Biostatistics & Bioinformatics
Elm & Carlton Streets
Buffalo, New York 14263
From: Bioc-devel on behalf
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