Re: [Bioc-devel] Pushing to upstream master

2018-12-26 Thread Turaga, Nitesh
Hi Anand, I’m not sure if the configuration on your machine is compromised in some way, but most likely everything is fine. I tested the exact same commands as you have and it seems to have worked. Steps: 10871 git clone https://github.com/PoisonAlien/maftools.git 10872 cd maftools 10873

Re: [Bioc-devel] Pushing to upstream master

2018-12-18 Thread Turaga, Nitesh
Hi Anand, The issue is the way you have updated your version numbers. Note that the last commit on upstream/master was the release version bump where your package has a version “1.9.0”. Please update the version to “1.9.1” and try pushing after the merge. I’ve outlined the steps you should ta

Re: [Bioc-devel] Pushing to upstream master

2018-12-18 Thread Anand MT
Hi Nitesh, I have checked my remotes, they are fine. $ git remote -v origin https://github.com/PoisonAlien/maftools.git (fetch) origin https://github.com/PoisonAlien/maftools.git (push) upstreamg...@git.bioconductor.org:packages/maftools.git (fetch) upstreamg...@git.bioconducto

Re: [Bioc-devel] Pushing to upstream master

2018-12-17 Thread Turaga, Nitesh
I need more information to help you. Please check http://bioconductor.org/developers/how-to/git/faq/, #14 especially. And any others you may need. > On Dec 17, 2018, at 12:46 PM, Anand MT wrote: > > Hi Nitesh, > > Yes, I have pulled from upstream but still the same issue. > > $ git pull up

Re: [Bioc-devel] Pushing to upstream master

2018-12-17 Thread Anand MT
Hi Nitesh, Yes, I have pulled from upstream but still the same issue. $ git pull upstream master From git.bioconductor.org:packages/maftools * branchmaster -> FETCH_HEAD Already up to date. $ git status On branch devel nothing to commit, working tree clean $ git push upstream ma

Re: [Bioc-devel] Pushing to upstream master

2018-12-17 Thread Turaga, Nitesh
Hi, Have your tried the command mentioned in the error message git pull This is important. Once that is done, “IF” you have merge conflicts, please do http://bioconductor.org/developers/how-to/git/resolve-conflicts/ Best, Nitesh > On Dec 17, 2018, at 10:22 AM, Anand MT