m: "Sean Davis"
> To: "Dan Tenenbaum"
> Cc: "Vincent Carey" , "bioc-devel"
>
> Sent: Sunday, May 8, 2016 5:00:41 PM
> Subject: Re: [Bioc-devel] GEOquery for Bioc devel
> Hi, all.
>
> Sorry for the hiccup. The problem appears to h
any case, it's
> early-cycle devel.
>
> Dan
>
>
> - Original Message -
>> From: "Dan Tenenbaum"
>> To: "Vincent Carey"
>> Cc: "bioc-devel"
>> Sent: Sunday, May 8, 2016 8:49:09 AM
>> Subject: Re: [Bioc-de
GEOmetadb had an issue with Dropbox jerking around URLs (cf
https://github.com/ttriche/simpleSampleSearch/blob/master/R/checkForUpdates.R
); I wonder if this might be related? I'd hate for GEO to become as flaky as
biomaRt.
I should have submitted simpleSampleSearch for 3.3 but it seemed too t
om: "Dan Tenenbaum"
> To: "Vincent Carey"
> Cc: "bioc-devel"
> Sent: Sunday, May 8, 2016 8:49:09 AM
> Subject: Re: [Bioc-devel] GEOquery for Bioc devel
> Maybe. If the package does not build for many days on end, it's more than
> flakiness and one w
Carey"
> To: "Dan Tenenbaum"
> Cc: "Kasper Daniel Hansen" , "bioc-devel"
>
> Sent: Sunday, May 8, 2016 8:46:57 AM
> Subject: Re: [Bioc-devel] GEOquery for Bioc devel
> Hmm. Very important piece of software so we should try to remedy this.
Hmm. Very important piece of software so we should try to remedy this. I
had assigned some GEOquery problems in the edX class and there were some
people who could not get getGEO to work, but the problem seemed
intermittent. There was a workaround posted on the support site which
involved separat
It has not built since the devel (3.4) builds started. Apparently GEO has been
pretty flaky.
Dan
- Original Message -
> From: "Kasper Daniel Hansen"
> To: "bioc-devel"
> Sent: Sunday, May 8, 2016 5:54:59 AM
> Subject: [Bioc-devel] GEOquery for Bioc devel
> I don't see GEOquery for Bi
