Hi BioC team,
I'd like to report the progress on the metabolomics docker image.
We now have a fork of https://github.com/Bioconductor/bioc_docker
on https://github.com/phnmnl/bioc_docker which includes
the devel_metabolomic image, which build successfully
on our jenkins at
http://phenomenal-h
Sure, send a pull request.
Pushing is done automatically.
https://github.com/Bioconductor/bioc_docker/blob/master/Rakefile#L98-L102
Dan
- Original Message -
> From: "Steffen Neumann"
> To: "bioc-devel"
> Sent: Friday, March 18, 2016 1:37:49 AM
> Subj
- Original Message -
> From: "Levi Waldron"
> To: "Dan Tenenbaum"
> Cc: bioc-devel@r-project.org
> Sent: Sunday, January 25, 2015 11:45:23 AM
> Subject: Re: [Bioc-devel] Announcing Docker containers for Bioconductor
>
>
>
>
>
On Sun, Jan 25, 2015 at 2:02 PM, Dan Tenenbaum
wrote:
> It is, kind of...in the "Bioconductor Release" box at upper right. I could
> make it more prominent, though.
Oops - that is probably good enough, I just missed it when I was trying to
remember the name of docker. I guess there could be a
- Original Message -
> From: "Levi Waldron"
> To: bioc-devel@r-project.org
> Sent: Sunday, January 25, 2015 9:33:56 AM
> Subject: Re: [Bioc-devel] Announcing Docker containers for Bioconductor
>
> Perhaps docker should be mentioned on
> http://master.bi
Perhaps docker should be mentioned on http://master.bioconductor.org/install ?
On Sun, Jan 11, 2015 at 12:47 PM, Elena Grassi wrote:
> Yup, thank you very much: I had to link the dir to
> /home/$USER/matrix_rider and it worked perfectly.
>
> E.
> --
> $ pom
>
> ___
Yup, thank you very much: I had to link the dir to
/home/$USER/matrix_rider and it worked perfectly.
E.
--
$ pom
___
Bioc-devel@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/bioc-devel
- Original Message -
> From: "Dan Tenenbaum"
> To: "Elena Grassi"
> Cc: bioc-devel@r-project.org
> Sent: Thursday, January 8, 2015 10:18:50 AM
> Subject: Re: [Bioc-devel] Announcing Docker containers for Bioconductor
>
>
>
> -
Thank you very much, tomorrow I will apply this approach!
E.
___
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- Original Message -
> From: "Elena Grassi"
> To: "Dan Tenenbaum"
> Cc: bioc-devel@r-project.org
> Sent: Thursday, January 8, 2015 8:45:37 AM
> Subject: Re: [Bioc-devel] Announcing Docker containers for Bioconductor
>
> On Thu, Jan 8, 2015 a
On Thu, Jan 8, 2015 at 4:43 PM, Dan Tenenbaum wrote:
>> I have a strange (ok, at least to me :) ) issue concerning volumes.
>> On a machine (debian testing/unstable up to date) everything works
>> smoothly when I do something like:
>> data@decoder:~$ docker run -v
>> /home/data/Dropbox/work/
>> ma
errors not just working
code
Cheers
Rad
On Thu, Jan 8, 2015 at 7:43 AM, Dan Tenenbaum
wrote:
>
>
> - Original Message -
> > From: "Elena Grassi"
> > To: bioc-devel@r-project.org
> > Sent: Thursday, January 8, 2015 5:11:50 AM
> > Subject: Re
- Original Message -
> From: "Elena Grassi"
> To: bioc-devel@r-project.org
> Sent: Thursday, January 8, 2015 5:11:50 AM
> Subject: Re: [Bioc-devel] Announcing Docker containers for Bioconductor
>
> Thanks, this is really useful and I was looking forward to i
Thanks, this is really useful and I was looking forward to it after
having used rocker!
I have a strange (ok, at least to me :) ) issue concerning volumes.
On a machine (debian testing/unstable up to date) everything works
smoothly when I do something like:
data@decoder:~$ docker run -v
/home/data
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