Re: [Bioc-devel] Readme in Rmd and md formats; .Rbuildignore'd files

2025-03-15 Thread Lluís Revilla
Hi, On Fri, 14 Mar 2025 at 15:53, Marcel Ramos wrote: > > Hi, > > On 3/14/25 5:42 AM, Lluís Revilla wrote: > > Hi! > > Before moving to git (and shortly after), Bioconductor used to support > these kind of files. > > Can you point to where in the documentation these files were supported? I don't

Re: [Bioc-devel] Readme in Rmd and md formats; .Rbuildignore'd files

2025-03-14 Thread Marcel Ramos
Hi, On 3/14/25 5:42 AM, Lluís Revilla wrote: > Hi! > > Before moving to git (and shortly after), Bioconductor used to support > these kind of files. Can you point to where in the documentation these files were supported? > One can still find repositories with these files on code.bioconductor.org

Re: [Bioc-devel] Readme in Rmd and md formats; .Rbuildignore'd files

2025-03-14 Thread Lluís Revilla
Hi! Before moving to git (and shortly after), Bioconductor used to support these kind of files. One can still find repositories with these files on code.bioconductor.org. As these files are optional and might not even be described by guidelines they do not bother new developers (or Bioconductor c

Re: [Bioc-devel] Readme in Rmd and md formats; .Rbuildignore'd files

2025-03-11 Thread Martha M
Hi Leonardo, BioC doesn't oppose an Rmd -- you just need to include the eval=F in the package installation code chunk. If helpful, please have a look at our package GitHub: https://bioconductor.org/packages/release/bioc/html/rhinotypeR.html Best, Martha On Tue, 11 Mar 2025 at 14:05, Leonardo Co

Re: [Bioc-devel] Readme in Rmd and md formats; .Rbuildignore'd files

2025-03-11 Thread Marcel Ramos Pérez
Hi Leo! As Martha responded, there is no issue with having a README.Rmd in the package folder. (The section is not so clear and could use some revision) Note that some authors maintain a README.md file without an Rmd. For some of my packages, I re-use the vignette to generate the README.md file.