Re: [Bioc-devel] Possible https://code.bioconductor.org SSL certificate issue

2024-03-06 Thread Robert M. Flight
curl works for me now as well. Glad it's resolved! -Robert On Wed, Mar 6, 2024 at 11:13 AM Gábor Csárdi wrote: > Yes, it started failing about then, so I am pretty sure it is related. > > Thanks, Gabor > > On Wed, 6 Mar 2024 at 16:39, Mike Smith wrote: > > > Maintainer of the code.bioconducto

Re: [Bioc-devel] Possible https://code.bioconductor.org SSL certificate issue

2024-03-06 Thread Gábor Csárdi
Yes, it started failing about then, so I am pretty sure it is related. Thanks, Gabor On Wed, 6 Mar 2024 at 16:39, Mike Smith wrote: > Maintainer of the code.bioconductor.org site here. Thanks for the > report. > > The certificate is exactly the same as the one used by all other > bioconductor.

Re: [Bioc-devel] Possible https://code.bioconductor.org SSL certificate issue

2024-03-06 Thread Mike Smith
Certificate updated with the full chain. Strike this one down to user error on my part. It looks like it's now working with curl from my perspective. Please let me know if that's not the case, either by replying here or opening an issue at https://github.com/Bioconductor/code.bioconductor.org C

Re: [Bioc-devel] Possible https://code.bioconductor.org SSL certificate issue

2024-03-06 Thread Mike Smith
Maintainer of the code.bioconductor.org site here. Thanks for the report. The certificate is exactly the same as the one used by all other bioconductor.org sites, however we recently changed (February 21st) how it is applied to the code.bioconductor.org subdomain. Did you happen to try this more

Re: [Bioc-devel] Possible https://code.bioconductor.org SSL certificate issue

2024-03-06 Thread Spencer Nystrom
My strong suspicion is this is because curl does not support AIA via openSSL on Linux. But browsers will use AIA (hence the reports of Firefox, etc working). Here's an old GitHub issue referencing the problem though it's not the most recent writing on the topic. https://github.com/curl/curl/issue

Re: [Bioc-devel] Possible https://code.bioconductor.org SSL certificate issue

2024-03-06 Thread Robert M. Flight
That does seem weird. curl does indeed complain, but both Edge and Firefox running on my Pop!OS 22.04 have no problems with the certificate. -Robert On Wed, Mar 6, 2024 at 3:41 AM Gábor Csárdi wrote: > I can't find any Linux distro that accepts that certificate. Even > Debian testing fails wit

Re: [Bioc-devel] Possible https://code.bioconductor.org SSL certificate issue

2024-03-06 Thread Gábor Csárdi
I can't find any Linux distro that accepts that certificate. Even Debian testing fails with a pretty recent certificate bundle, see below. Anyway, I can download your cert and add it to my cert bundle, so this is not a problem for me. It is just a FYI, that currently this site fails for pretty muc

Re: [Bioc-devel] Possible https://code.bioconductor.org SSL certificate issue

2024-03-06 Thread Anestis Gkanogiannis via Bioc-devel
This is a curl problem, nothing wrong with the SSL certificate of code.bioconductor.org  Try installing the ca-certificates package on your ubuntu. Best regards, Anestis Gkanogiannis, PhD - linkedin.com/in/anestis-gkanogiannis github.com/gkanogiannis www.gkanogiannis.com __