conductor Core Team
Roswell Park Cancer Institute
Department of Biostatistics & Bioinformatics
Elm & Carlton Streets
Buffalo, New York 14263
----
*From:* Bioc-devel on
behalf of campos
*Sent:* Thursday, April 5,
er Institute
Department of Biostatistics & Bioinformatics
Elm & Carlton Streets
Buffalo, New York 14263
*From:* Bioc-devel on
behalf of campos
*Sent:* Thursday, April 5, 2018 7:45:57 AM
*To:* Morgan, Martin; b
.7.2.
Lori Shepherd
Bioconductor Core Team
Roswell Park Cancer Institute
Department of Biostatistics & Bioinformatics
Elm & Carlton Streets
Buffalo, New York 14263
--------
*From:* Bioc-devel on
behalf of campos
*Sent:* Thursday, April 5, 2018 7:45:57 AM
*To:* Morgan, Martin; bioc-devel
:packages/STAN (fetch)
>>>>>>> ��� origin��� g...@git.bioconductor.org:packages/STAN (push)
>>>>>>>
>>>>>>> So I would
>>>>>>>
>>>>>>> ��� STAN master$ git pull origin master
>>>>>>>
>>>>>>> to incor
---
*From:* Bioc-devel on
behalf of campos
*Sent:* Thursday, April 5, 2018 7:45:57 AM
*To:* Morgan, Martin; bioc-devel
*Subject:* Re: [Bioc-devel] vignette problems
Hey Martin,
I pushed new changes since last friday but in
https://bioconductor.org/checkResults/3.7/bioc-LATEST/STAN/
s
ton Streets
Buffalo, New York 14263
*From:* Bioc-devel on
behalf of campos
*Sent:* Thursday, April 5, 2018 7:45:57 AM
*To:* Morgan, Martin; bioc-devel
*Subject:* Re: [Bioc-devel] vignette problems
Hey Martin,
I pushed ne
* Bioc-devel on
behalf of campos
*Sent:* Thursday, April 5, 2018 7:45:57 AM
*To:* Morgan, Martin; bioc-devel
*Subject:* Re: [Bioc-devel] vignette problems
Hey Martin,
I pushed new changes since last friday but in
https://bioconductor.org/checkResults/3.7/bioc-LATEST/STAN/
says that
the last
*From:* Bioc-devel on behalf
of campos
*Sent:* Thursday, April 5, 2018 7:45:57 AM
*To:* Morgan, Martin; bioc-devel
*Subject:* Re: [Bioc-devel] vignette problems
Hey Martin,
I pushed new changes since last friday but in
https://bioconductor.org/checkResults/3.7/bioc-LATE
, New York 14263
*From:* Bioc-devel on
behalf of campos
*Sent:* Thursday, April 5, 2018 7:45:57 AM
*To:* Morgan, Martin; bioc-devel
*Subject:* Re: [Bioc-devel] vignette problems
Hey Martin,
I pushed new changes since last f
Department of Biostatistics & Bioinformatics
Elm & Carlton Streets
Buffalo, New York 14263
*From:* Bioc-devel on
behalf of campos
*Sent:* Thursday, April 5, 2018 7:45:57 AM
*To:* Morgan, Martin; bioc-devel
*Subject:
Biostatistics & Bioinformatics
Elm & Carlton Streets
Buffalo, New York 14263
*From:* Bioc-devel on behalf
of campos
*Sent:* Thursday, April 5, 2018 7:45:57 AM
*To:* Morgan, Martin; bioc-devel
*Subject:* Re: [Bioc-devel] vignette problems
Hey Martin,
I pushed new changes since las
4263
*From:* Bioc-devel on behalf of
campos
*Sent:* Thursday, April 5, 2018 7:45:57 AM
*To:* Morgan, Martin; bioc-devel
*Subject:* Re: [Bioc-devel] vignette problems
Hey Martin,
I pushed new changes since last friday
lo, New York 14263
*From:* Bioc-devel on behalf of
campos
*Sent:* Thursday, April 5, 2018 7:45:57 AM
*To:* Morgan, Martin; bioc-devel
*Subject:* Re: [Bioc-devel] vignette problems
Hey Martin,
I pushed new changes since last friday but in
https:
5, 2018 7:45:57 AM
*To:* Morgan, Martin; bioc-devel
*Subject:* Re: [Bioc-devel] vignette problems
Hey Martin,
I pushed new changes since last friday but in
https://bioconductor.org/checkResults/3.7/bioc-LATEST/STAN/ says that
the last change date was friday. Any idea what is the problem?
I hav
gt;>
>>> Bioconductor Core Team
>>>
>>> Roswell Park Cancer Institute
>>>
>>> Department of Biostatistics & Bioinformatics
>>>
>>> Elm & Carlton Streets
>>>
>>> Buffalo, New York 14263
>>>
>>>
>>&
sday, April 5, 2018 7:45:57 AM
*To:* Morgan, Martin; bioc-devel
*Subject:* Re: [Bioc-devel] vignette problems
Hey Martin,
I pushed new changes since last friday but in
https://bioconductor.org/checkResults/3.7/bioc-LATEST/STAN/ says that
the last change date was friday. Any idea what is the problem?
stitute
>
> Department of Biostatistics & Bioinformatics
>
> Elm & Carlton Streets
>
> Buffalo, New York 14263
>
>
> *From:* Bioc-devel on behalf of
> campos
> *Sent:* Thursday, April 5,
stitute
>
> Department of Biostatistics & Bioinformatics
>
> Elm & Carlton Streets
>
> Buffalo, New York 14263
>
>
> *From:* Bioc-devel on behalf of
> campos
> *Sent:* Thursday, April 5,
Buffalo, New York 14263
From: Bioc-devel on behalf of campos
Sent: Thursday, April 5, 2018 7:45:57 AM
To: Morgan, Martin; bioc-devel
Subject: Re: [Bioc-devel] vignette problems
Hey Martin,
I pushed new changes since last friday but in
https://biocondu
Hey Martin,
I pushed new changes since last friday but in
https://bioconductor.org/checkResults/3.7/bioc-LATEST/STAN/ says that
the last change date was friday. Any idea what is the problem?
I have tried to fix the problems with memory and all you told me.
Best,
Rafael
On 03.04.2018 17:06
Please use 'reply all' so that the mailing list remains engaged.
Check out the release schedule
http://bioconductor.org/developers/release-schedule/
in particular
Wednesday April 25
- Deadline for packages passing ‘‘R CMD build’’ and ‘‘R CMD check’’
without errors or warnings.
so you still
On 04/01/2018 08:06 PM, Martin Morgan wrote:
On 04/01/2018 03:53 PM, campos wrote:
Dear Martin,
I am trying to fix this problem but I am really lost... Do you mean
C++ code? Becasue there is no C code in the whole package. I really
don't know what the problem might be.
Please keep the c
On 04/01/2018 03:53 PM, campos wrote:
Dear Martin,
I am trying to fix this problem but I am really lost... Do you mean C++
code? Becasue there is no C code in the whole package. I really don't
know what the problem might be.
Please keep the conversation on the bioc-devel mailing list, so t
On 03/29/2018 01:07 PM, campos wrote:
Dear bioc-devel team,
I have made some changes in the package STAN and although it seems to
install correctly, I have problems with timeout and error in windows...
Could someone help me to improve the time?
https://bioconductor.org/checkResults/3.7/bio
Dear bioc-devel team,
I have made some changes in the package STAN and although it seems to
install correctly, I have problems with timeout and error in windows...
Could someone help me to improve the time?
https://bioconductor.org/checkResults/3.7/bioc-LATEST/STAN/
Best,
Rafael
On 28.03.
When I try and install the version on the master branch of the
Bioconductor git repository I get
STAN master$ Rdev --vanilla CMD INSTALL .
* installing to library ‘/home/mtmorgan/R/x86_64-pc-linux-gnu-library
...
** testing if installed package can be loaded
Error: package or namespace load fail
Dear bioc-devel team,
I am developing the STAN packages and I am running into problems when
trying to build my package. The problem is the following:
Error in vignette_type(Outfile) :
Vignette product 'STAN.tex' does not have a known filename extension
('NA')
ERROR: installing vignettes fa
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