Hi Pooja,
Looks like std::auto_ptr is no longer valid in C++17:
https://stackoverflow.com/questions/69116001/how-do-i-re-enable-c17-removed-features-in-clang
Weird thing is that the compiler is invoked with -std=gnu++17 on all
platforms but compilation of msa only fails on Mac.
It looks like u
Hi Hervé,
I reached out to Ulrich who is the maintainer for msa package. He found
your suggestions very helpful and used the option 2 you suggested to fix
the error. Looks like the changes he made have fixed everything on windows
and Linux platforms but the macOS platform is still showing an error
On 21/03/2023 12:48, Pooja Gangras wrote:
> Hi Herve,
>
> Thank you for the quick response.
>
> So what surprises me is that msa was compiling and building just fine
> on the devel branch until now.
As I said, the switch from C++14 to C++17 happened not too long ago in
the devel version of R. An
Hi Herve,
Thank you for the quick response.
So what surprises me is that msa was compiling and building just fine on
the devel branch until now. And hence so was surfaltr, without any errors.
There was a warning in surfaltr which one can see on the 3.16 release, I
had fixed it in the devel branch
Hi Pooja,
Generally speaking there are 3 things you can do when a dep breaks your
package:
1. Consider getting rid of that dep.
2. Contact the author/maintainers of the dep to let them know about the
problem. If you can suggest a fix (e.g. by sending a PR on GitHub),
that's even better, as
Hi,
I got an email yesterday alerting me of the error in the build in the new
BioC release. Upon looking into the error further I found out that the
error is occurring because a dependency 'msa' package is not being built in
the new release likely due to some issues with the C++ compiler (just
gue
