Re: [Bioc-devel] request to create BSgenome Bos_taurus_UMD3.1.1

On 03/29/2015 12:31 AM, Byungkuk Min wrote: I appreciate your effort, but I'm having trouble to download it. > source("http://bioconductor.org/biocLite.R";) > biocLite("BSgenome.Btaurus.UCSC.bosTau8") Warning message: package ‘BSgenome.Btaurus.UCSC.bosTau8’ is not available (for R version 3.

Re: [Bioc-devel] request to create BSgenome Bos_taurus_UMD3.1.1

So I went ahead and did BSgenome.Btaurus.UCSC.bosTau8. It should become available via biocLite() in the next couple of hours (in BioC devel only). H. On 03/26/2015 12:54 AM, Hervé Pagès wrote: Hi Byungkuk, On 03/25/2015 10:17 PM, Byungkuk Min wrote: Dear Dr.Pages, I've been trying to build a

Re: [Bioc-devel] request to create BSgenome Bos_taurus_UMD3.1.1

Hi Byungkuk, On 03/25/2015 10:17 PM, Byungkuk Min wrote: Dear Dr.Pages, I've been trying to build a BSgenome for Bos_taurus_UMD3.1.1 from NCBI . But I'm getting the same error message... library(BSgenome) forgeBSgenomeDataPkg("/PATH/TO/ge

[Bioc-devel] request to create BSgenome Bos_taurus_UMD3.1.1

Dear Dr.Pages, I've been trying to build a BSgenome for Bos_taurus_UMD3.1.1 from NCBI . But I'm getting the same error message... >library(BSgenome) > forgeBSgenomeDataPkg("/PATH/TO/genome.fa") Error: Line starting '>1 ...' is malformed! I d