Re: [Bioc-devel] possible ExperimentHub cache problem in the BBS with gDNAx

2025-07-01 Thread Robert Castelo via Bioc-devel
Streets > > > > Buffalo, New York 14263 > > > > ------------------------ > > *From:* Robert Castelo > > *Sent:* Friday, June 20, 2025 11:57 AM > > *To:* Kern, Lori > > *Cc:* bioc-devel@r-project.org &g

Re: [Bioc-devel] possible ExperimentHub cache problem in the BBS with gDNAx

2025-06-25 Thread Andres Wokaty
esday, June 24, 2025 11:19 AM To: Kern, Lori Cc: bioc-devel@r-project.org Subject: Re: [Bioc-devel] possible ExperimentHub cache problem in the BBS with gDNAx * This email originates from a sender outside of CUNY. Verify the sender before replying or clicking on links and attachments. * Hi, T

Re: [Bioc-devel] possible ExperimentHub cache problem in the BBS with gDNAx

2025-06-24 Thread Robert Castelo via Bioc-devel
& Carlton Streets > > Buffalo, New York 14263 > > > *From:* Robert Castelo > *Sent:* Friday, June 20, 2025 11:57 AM > *To:* Kern, Lori > *Cc:* bioc-devel@r-project.org > *Subject:* Re: [Bioc-devel] possible ExperimentHub cache problem in &g

[Bioc-devel] possible ExperimentHub cache problem in the BBS with gDNAx

2025-06-20 Thread Robert Castelo via Bioc-devel
Hi, I received the notice below about gDNAx devel failing in linux, here's the report: https://bioconductor.org/checkResults/devel/bioc-LATEST/gDNAx/nebbiolo2-buildsrc.html the error seems to have something to do with loading data from the cache of the ExperimentHub when building the vignette.

Re: [Bioc-devel] possible ExperimentHub cache problem in the BBS with gDNAx

2025-06-20 Thread Kern, Lori via Bioc-devel
ew York 14263 From: Robert Castelo Sent: Friday, June 20, 2025 11:57 AM To: Kern, Lori Cc: bioc-devel@r-project.org Subject: Re: [Bioc-devel] possible ExperimentHub cache problem in the BBS with gDNAx hi, yes, here they are: library(ExperimentHub) eh <- ExperimentHub() ehres <- subse

Re: [Bioc-devel] possible ExperimentHub cache problem in the BBS with gDNAx

2025-06-20 Thread Robert Castelo via Bioc-devel
prehensive Cancer Center > > Department of Biostatistics & Bioinformatics > > Elm & Carlton Streets > > Buffalo, New York 14263 > > > *From:* Bioc-devel on behalf of > Robert Castelo via Bioc-devel &g

Re: [Bioc-devel] possible ExperimentHub cache problem in the BBS with gDNAx

2025-06-20 Thread Kern, Lori via Bioc-devel
oc-devel on behalf of Robert Castelo via Bioc-devel Sent: Friday, June 20, 2025 11:11 AM To: bioc-devel@r-project.org Subject: [Bioc-devel] possible ExperimentHub cache problem in the BBS with gDNAx Hi, I received the notice below about gDNAx devel failing in linux, here's the report: h