Re: [Bioc-devel] my old MergedDataSet implementation

2013-07-25 Thread Vincent Carey
Thanks Tim We are collecting relevant resources in https://github.com/vjcitn/biocMultiAssay I will add your class definition as TTMergedDataSet we have some TCGA data (affy expression, RNA seq, miRNA) in inst/extdata from Levi Waldron. Currently these are all ExpressionSet instances. I will s

[Bioc-devel] my old MergedDataSet implementation

2013-07-24 Thread Tim Triche, Jr.
just for those who were interested, here is what I bolted together a LONG time ago warning: this will probably burn your retinas with its badness. also, no refclasses for colData that pertains across the child SummarizedExperiments (doh) require(GenomicRanges) ## ensure that SummarizedExperime