oh! that's cool! super nice, will try it.
thanks a lot!
On 08/20/2015 12:46 PM, Adrienne Stilp wrote:
Hi Lorena,
For your last question about coding style, you could look into the lintr
package:
https://github.com/jimhester/lintr
You can run it either as an R function, or add it as a plugin
Hi Lorena,
For your last question about coding style, you could look into the lintr
package:
https://github.com/jimhester/lintr
You can run it either as an R function, or add it as a plugin to some editors.
The developer, Jim Hester, is also part of the Bioconductor team!
Adrienne
> On Aug 14
Thanks a lot Hervé.
Your suggestions are perfect. I fully imported these classes because I
realized that it would be less chances of errors, as you say here.
I used that, and it is true that I am using these functions for dplyr.
The reason I tried to do with dplyr is was to summarize quicker.
Hi Lorena,
In your particular case it seems to me that you're using dplyr
internally for convenient data frame transformations (nothing that
couldn't be done with plain R BTW), and that you're only using a few
dplyr symbols for this. The codetoolsBioC package could be useful to
help you identify
As I understand it, the function sometimes gives false positives (I have
never experience it myself though - Michael Lawrence has, but perhaps his
use cases are more complicated). My guess is that this is a showstopper
for including it in codetools (where it would be great to go, in my
opinion).
Hi,
thanks a lot for the link!, I would definitely try that one...you save
me a lot of time!
On 08/14/2015 10:03 AM, Kasper Daniel Hansen wrote:
> Indeed, you need to use importFrom to selectively import.
>
> In this process you'll realize how great it would be to have a
> function called
> i
On Fri, Aug 14, 2015 at 10:03 AM, Kasper Daniel Hansen <
kasperdanielhan...@gmail.com> wrote:
> Indeed, you need to use importFrom to selectively import.
>
> In this process you'll realize how great it would be to have a function
> called
> importEverythingFromExcept( PACKAGE, NOT_THESE_FUNCTIO
Indeed, you need to use importFrom to selectively import.
In this process you'll realize how great it would be to have a function
called
importEverythingFromExcept( PACKAGE, NOT_THESE_FUNCTIONS)
but last time I raised this issue on R-devel, I was gently shut down.
In the meantime you should us
Hi,
I am trying to get right my new package
(http://github.com/lpantano/isomiRs). But I am having some problems with
the packages I import.
The main problem is that I get warnings while loading my packages
because some dplyr replaces functions in others packages like S4Vectors
and others.
