Re: [Bioc-devel] benchdamic TIMEOUT in merida1 and kunpeng2

Dear Martin and Levi, I truly appreciate your tips and the time you took to assist me. I'm going to look further into your suggestions by trying to reduce the computational time needed to build the vignette. I'll let you know if I manage to fix the problem. Matteo Il giorno lun 17 lug 2023 alle o

Re: [Bioc-devel] benchdamic TIMEOUT in merida1 and kunpeng2

It looks to me like benchdamic doesn't actually use the HMP16SData package, but a repackaged example dataset placed in the data/ directory. I do notice that the vignette takes very long to run, especially the chunks below. My guess is that you are seeing differences in speed or number of available

Re: [Bioc-devel] benchdamic TIMEOUT in merida1 and kunpeng2

HI, I don't have a good explanation why it was timing out on kunpeng2 but I think it will pass from now on! Here is what I did: 1) I tried to build benchdamic on kunpeng2: $ R CMD build --keep-empty-dirs --no-resave-data benchdamic * checking for file ‘benchdamic/DESCRIPTION’ ... OK * preparing

[Bioc-devel] benchdamic TIMEOUT in merida1 and kunpeng2

Dear all, my package benchdamic has been giving TIMEOUT in the build results on merida1 (release macOS) and kunpeng2 (devel Linux). The devel and release ver