Re: [Bioc-devel] appveyor CI failing with biocparam

2018-03-30 Thread Marcel Ramos
Hi Vivek, Make sure you are using the appropriate version of R. Your appveyor code says you're using 3.4.4. https://ci.appveyor.com/project/vivekbhr/icetea#L22 Add a chunk like: ``` environment:   global: ...   matrix:     - R_VERSION: devel ``` after your "global:" tag under the "environmen

Re: [Bioc-devel] appveyor CI failing with biocparam

2018-03-29 Thread Vivek Bhardwaj
Hi Martin Thanks for the quick reply. I think that would have been the real issue most probably. I fixed it, though the build still failed, but this time it might be due to build cache or other issues with appveyor? A unit test that was fixed earlier also keeps failing on appveyor. My travis b

Re: [Bioc-devel] appveyor CI failing with biocparam

2018-03-29 Thread Martin Morgan
Hi Vivek... On 03/29/2018 08:39 AM, Vivek Bhardwaj wrote: Dear All I have travis and appveyor CI running for my upcoming package in development. I find that the appveyor CI fails for the function `GenomicAlignments::summarizeOverlaps`, which is called by one of the functions in my package. It d

[Bioc-devel] appveyor CI failing with biocparam

2018-03-29 Thread Vivek Bhardwaj
Dear All I have travis and appveyor CI running for my upcoming package in development. I find that the appveyor CI fails for the function `GenomicAlignments::summarizeOverlaps`, which is called by one of the functions in my package. It doesn't recognize the BPPARAM argument (appveyor build is