Re: [Bioc-devel] Update data in data package, pcxnData

2018-04-10 Thread Sokratis Kariotis
; > Bioconductor Core Team > > Roswell Park Cancer Institute > > Department of Biostatistics & Bioinformatics > > Elm & Carlton Streets > > Buffalo, New York 14263 > -- > *From:* Sokratis Kariotis > *Sent:* Thursday, March 29,

Re: [Bioc-devel] Update data in data package, pcxnData

2018-04-05 Thread Shepherd, Lori
is Sent: Thursday, April 5, 2018 8:02:14 AM To: Shepherd, Lori Cc: Turaga, Nitesh; bioc-devel Subject: Re: [Bioc-devel] Update data in data package, pcxnData Hey all, The issues remain the same in both packages: https://bioconductor.org/checkResults/3.6/data-experiment-LATEST/pcxnData/malbec1-build

Re: [Bioc-devel] Update data in data package, pcxnData

2018-04-05 Thread Sokratis Kariotis
update master? Or are you having access trouble > >> for both branches? Please use reply all so that other members on the > team > >> can answer when appropriate and the responses go to the mailing list. > >> > >> Your package is in the git repository and has

Re: [Bioc-devel] Update data in data package, pcxnData

2018-03-30 Thread Shepherd, Lori
Buffalo, New York 14263 From: Sokratis Kariotis Sent: Thursday, March 29, 2018 6:49:47 AM To: Turaga, Nitesh Cc: Shepherd, Lori; bioc-devel Subject: Re: [Bioc-devel] Update data in data package, pcxnData Hey all, The packages' changes went through to the 3_6

Re: [Bioc-devel] Update data in data package, pcxnData

2018-03-29 Thread Sokratis Kariotis
te and the responses go to the mailing list. >> >> >> >> Your package is in the git repository and has access with the ID >> s.kariotis. >> >> Can you please copy the commands with the output you are receiving that >> >> make you think that you

Re: [Bioc-devel] Update data in data package, pcxnData

2018-03-27 Thread Sokratis Kariotis
; >> Please also include the output of > >> > >> git remote -v > >> > >> and > >> > >> ssh -T g...@git.bioconductor.org > >> (you should see RW access next to your package) > >> > >> > >> Please > >

Re: [Bioc-devel] Update data in data package, pcxnData

2018-03-26 Thread Turaga, Nitesh
>> Bioconductor Core Team >> >> Roswell Park Cancer Institute >> >> Department of Biostatistics & Bioinformatics >> >> Elm & Carlton Streets >> >> Buffalo, New York 14263 >> >> >> -- >&

Re: [Bioc-devel] Update data in data package, pcxnData

2018-03-23 Thread Sokratis Kariotis
Park Cancer Institute > > Department of Biostatistics & Bioinformatics > > Elm & Carlton Streets > > Buffalo, New York 14263 > > > -- > *From:* Bioc-devel on behalf of > Shepherd, Lori > *Sent:* Friday, November 24, 2017 10:13 AM > *To:*

Re: [Bioc-devel] Update data in data package, pcxnData

2018-03-23 Thread Shepherd, Lori
ject: Re: [Bioc-devel] Update data in data package, pcxnData You should make changes and push to the master branch of your package at g...@git.bioconductor.org:packages/pcxnData.git . This will update the devel version of your package. As long as the package builds correctly, It will be avail

Re: [Bioc-devel] Update data in data package, pcxnData

2017-11-24 Thread Shepherd, Lori
nt of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York 14263 From: Bioc-devel on behalf of Sokratis Kariotis Sent: Friday, November 24, 2017 10:02:13 AM To: bioc-devel Subject: [Bioc-devel] Update data in data package, pcxnData Hi a

[Bioc-devel] Update data in data package, pcxnData

2017-11-24 Thread Sokratis Kariotis
Hi all, I have a data package (pcxnData) that got released in 3.6 and I am wondering how long will it take, if I changed some of the data in that package for them to be publicly available in bioconductor instead of the old data. Can they be available sooner than the next release? Thanks in advance