mpotent. Sorry for introducing the bug.
Martin
great! thanks Martin!!
robert.
Lori Shepherd
Bioconductor Core Team
Roswell Park Cancer Institute
Department of Biostatistics & Bioinformatics
Elm & Carlton Streets
Buffalo, New York 14263
---------------
mpotent. Sorry for introducing the bug.
Martin
Lori Shepherd
Bioconductor Core Team
Roswell Park Cancer Institute
Department of Biostatistics & Bioinformatics
Elm & Carlton Streets
Buffalo, New York 14263
--------------------
*From:* Bioc-devel on behalf of
Robert Castel
ERROR, but you can still use the same file that was used
> > to create the TabixFile
> > tbx <- open(TabixFile(fl, yieldSize=100))
> > TabixFileList(fl)
> >
> >
> >
> > Lori Shepherd
> >
> > Bioconductor Core Team
> >
> > Roswell Park Cancer Institute
> >
> > Department of Biostatistics & Bioinfor
l)
>
>
>
> Lori Shepherd
>
> Bioconductor Core Team
>
> Roswell Park Cancer Institute
>
> Department of Biostatistics & Bioinformatics
>
> Elm & Carlton Streets
>
> Buffalo, New York 14263
>
> -----------------
Department of Biostatistics & Bioinformatics
Elm & Carlton Streets
Buffalo, New York 14263
From: Bioc-devel on behalf of Robert Castelo
Sent: Wednesday, December 28, 2016 11:50:58 AM
To: bioc-devel@r-project.org
Subject: [Bioc-devel] TabixFileList() constructo
hi,
the 'TabixFileList()' constructor in Rsamtools seems to be broken in devel:
library(Rsamtools)
example(TabixFileList) ## which actually does not construct any
'TabixFileList'
TabixFileList(tbx)
Error in as.vector(x, "character") :
cannot coerce type 'environment' to vector of type 'chara
