Re: [Bioc-devel] Subsetting eSet-like objects with duplicated indices

2014-02-12 Thread Benilton Carvalho
Thanks a lot, Martin! Will work on fixing things on my end. b On Feb 12, 2014 12:49 PM, "Martin Morgan" wrote: > On 02/11/2014 05:03 PM, Benilton Carvalho wrote: > >> Hi, >> >> I'm trying to understand why FeatureSet objects behave slightly different >> than eSet objects. >> > > There's a combina

Re: [Bioc-devel] Subsetting eSet-like objects with duplicated indices

2014-02-12 Thread Martin Morgan
On 02/11/2014 05:03 PM, Benilton Carvalho wrote: Hi, I'm trying to understand why FeatureSet objects behave slightly different than eSet objects. There's a combination of things going on, some of which are unfortunate / unintended. The basic problem is that, with regard to row names, subset

[Bioc-devel] Subsetting eSet-like objects with duplicated indices

2014-02-11 Thread Benilton Carvalho
Hi, I'm trying to understand why FeatureSet objects behave slightly different than eSet objects. Here's the one example I'm trying to work out: if (!require(pd.hugene.1.0.st.v1)){ library(BiocInstaller) biocLite('pd.hugene.1.0.st.v1') } library(oligoData) data(affyGeneFS) affyGeneFS data(sam