Thanks Jialin for the report. This should be addressed in GenomicRanges
1.33.13:
https://github.com/Bioconductor/GenomicRanges/commit/9fa12796dcb076ddb34b6f2c8115e358d9a0aeab
Other "show" methods suffer from the same problem (e.g. methods for
IRanges, Hits, GAlignments, etc...) and will also ne
Dear bioc-devel,
I am not sure whether I should bring this up. This is a problem that would
happen only in some rare cases. When the name of a meta column of GRanges is
the name of an argument in the data.frame function, such as stringsAsFactors,
the GRanges will not able to print and some func