Hi,
On 10/23/2013 11:55 AM, Gabriel Becker wrote:
Charles,
If you put your scripts (or any file) in inst/folder within your package
structure you can always get the path to them by doing
system.file("folder/", package="")
This is not portable. Better use:
system.file("folder", "", package=
package
- Original Message -
> From: "Gabriel Becker"
> To: "Charles Warden"
> Cc: bioc-devel@r-project.org
> Sent: Wednesday, October 23, 2013 11:55:05 AM
> Subject: Re: [Bioc-devel] Running Perl Scripts from R package
>
> Charles,
>
> If yo
- Original Message -
> From: "Gabriel Becker"
> To: "Charles Warden"
> Cc: bioc-devel@r-project.org
> Sent: Wednesday, October 23, 2013 11:55:05 AM
> Subject: Re: [Bioc-devel] Running Perl Scripts from R package
>
> Charles,
>
> If yo
Charles,
If you put your scripts (or any file) in inst/folder within your package
structure you can always get the path to them by doing
system.file("folder/", package="") regardless of
install location for the package. In other words, system.file can see all
folders in your inst directory, not ju
Hi,
I would like to develop a Bioconductor package that calls Perl scripts for
certain functions. I currently have a standalone program written in Perl that
calls Rscript at certain steps, so I would like to switch this around.
It looks like I can call Perl scripts using the 'system' command,
