Re: [Bioc-devel] Question reg devtools in MacOS High Sierra

2021-02-11 Thread Krithika Bhuvaneshwar
Thank you very much Martin, that was very helpful ! I had failed to catch that. When I ran "brew install openssl", it was already present in my mac, but I had to run install.packages("openssl") again for it to work. In case this is helpful to anyone, here is a full list of things I did to get t

Re: [Bioc-devel] Question reg devtools in MacOS High Sierra

2021-02-11 Thread Martin Morgan
The error says unable to load shared object '/Library/Frameworks/R.framework/Versions/4.1/Resources/library/openssl/libs/openssl.so': so it's having trouble loading the openssl R package. There are installation instructions for this package at https://github.com/jeroen/openssl#readme (I fo

Re: [Bioc-devel] Question reg devtools in MacOS High Sierra

2021-02-11 Thread Krithika Bhuvaneshwar
Hi Nitesh, Thanks for your reply. I managed to get libgit2 installed. But having trouble with its other dependencies - ‘gert’ Please see attached txt which is a full information of the error. Do you have an installation of R 4.1 that is more stable where devtools is working ? If yes, are you ab

Re: [Bioc-devel] Question reg devtools in MacOS High Sierra

2021-02-11 Thread Nitesh Turaga
Hi, Could you provide more information about the error you face with `brew install libgit2` ?? Without knowing what error message you see, it's hard to speculate about why devtools or gert didn’t work. Best, On 2/11/21, 12:00 AM, "Bioc-devel on behalf of Krithika Bhuvaneshwar" wrote:

[Bioc-devel] Question reg devtools in MacOS High Sierra

2021-02-10 Thread Krithika Bhuvaneshwar
Hello, We are the package maintainers of the CINdex package. Our package is giving build errors and we are investigating why. I'm currently working on setting up the environment so I can replicate the error. I have a MacOS High Sierra. Here is what I did: * downloaded R 4.1 from https://mac.r-pr