Re: [Bioc-devel] Printing DataFrame with nested data.frame/DataFrame/DataFrameList

2017-09-28 Thread Jialin Ma
Hi Hervé, Thanks for addressing it so quickly, I will check it when the new version if available for biocLite(). Thanks! Jialin On Thu, 2017-09-28 at 13:47 -0700, Hervé Pagès wrote: > Hi Jialin, > > Thanks for the excellent report. These "show" methods like > many others in Bioconductor, rely o

Re: [Bioc-devel] Printing DataFrame with nested data.frame/DataFrame/DataFrameList

2017-09-28 Thread Hervé Pagès
Hi Jialin, Thanks for the excellent report. These "show" methods like many others in Bioconductor, rely on low-level helper showAsCell() which was not working properly on data-frame-like or array-like objects with a single column, or on SplitDataFrameList objects. This should now be addressed. T

[Bioc-devel] Printing DataFrame with nested data.frame/DataFrame/DataFrameList

2017-09-28 Thread Jialin Ma
Dear all, I have a package in reviewing at https://github.com/Bioconductor/Contributions/issues/487, in which I would like to use a GRanges with nested data.frame or DataFrameList to represent the track data internally. However, the default show method does not seem to work well with such structu