Hi, Pabita.
This question is better asked on the bioconductor support site (
HTTPS://support.bioconductor.org). However, finding no evidence for
differential expression is not uncommon. Whether it is expected or not is
hard to comment on without data.
Sean
On Jul 30, 2016 10:43, "Pabita Basnet"
Hi all
I am using DEXSeq to analyse genome wide exon usage in RNA-Seq sample from
maize. I have two factors data. One is condition (weedy/weed-free) and
thiamethoxam treatment (treated/untreated). Each has 3 replicates. I wanted
to see the differential exon usage for weedy versus weed-free, treated
