Kenneth,
I agree with Kasper. I generally like the approach of getting the software
out there sooner rather than later. Especially if the paper you are talking
about is a method paper about the software algorithm, rather than a result
paper. In that case, getting it into a public, DOI'ed repositor
This is a subjective question. As a paper reviewer I like to see the
package accepted. That increases trust. As a package reviewer I like some
idea of what the package actually does, so a statement like "we implement X
which is described in (XX, in preparation), is also irritating.
Unless you're
Hi Gabe & Levi,
Here is my current plan:
1 - complete the requirements checklist (
http://www.bioconductor.org/developers/package-submission/)
2 - get feedback the in-house NGS team, and then from the rest of in-house
bioinformatics (others who use R more may spot some issues)
3 - set up pull req
ONE more note that Gabe reminded me of! As soon as your package is accepted
into bioc-devel, it will be accessible via
https://bioconductor.org/packages/mypackage/. Once it enters the release
branch, that URL will instead point to the release page.
On Tue, Apr 3, 2018 at 11:56 AM, Gabe Becker wro
Indeed, and to be a bit more explicit about Levi's point, you *can* publish
your package to bioconductor any time after the deadline, it will simply go
to the development repo for ~6 months, which, as he points out, may not be
a bad thing if it's not ready yet.
On Tue, Apr 3, 2018 at 8:06 AM, Levi
On Tue, Apr 3, 2018 at 5:32 AM, Kenneth Condon
wrote:
> Have I missed the deadline for the latest release? I have created a
> package, that runs great but there are a number of errors still from R CMD
> check that I am sorting out.
>
> This is my first R package so I'm not sure if development is
mail.com
Subject: [Bioc-devel] Missed deadline
Hello,
Have I missed the deadline for the latest release? I have created a
package, that runs great but there are a number of errors still from R CMD
check that I am sorting out.
This is my first R package so I'm not sure if development is far
Hello,
Have I missed the deadline for the latest release? I have created a
package, that runs great but there are a number of errors still from R CMD
check that I am sorting out.
This is my first R package so I'm not sure if development is far enough
along, although I suspect it might be.
Could
