Hi Davide,
Lots of good advice here. The main goal with two packages is to
minimize dependencies for the experiment data package as this is
presumed to be the less specialized package. Whenever you have a
package ready please be sure to follow the follow the instructions on
the link that He
This is a kind of a chicken and egg problem.
If the data in the experimental data package is in base R containers
(like just a matrix etc), it is pretty clear: the data package does
not depend on anything and the methods package either suggests or
depends on the data package.
However, in most cas
> You can solve the package size issue by putting your example data in a
> separate "experiment data" package
> (http://www.bioconductor.org/packages/release/data/experiment/).
>
> Stephanie
I fixed the package size issue with a secondary experiment data package
(flowFitExampleData)
It is n
Hi Davide,
Please refer to this page for how to submit your package:
http://bioconductor.org/developers/package-submission/
Thanks,
H.
http://www.bioconductor.org/developers/package-submission/
On 02/27/2013 08:25 AM, Stephanie M. Gogarten wrote:
You can solve the package size issue by pu
You can solve the package size issue by putting your example data in a
separate "experiment data" package
(http://www.bioconductor.org/packages/release/data/experiment/).
Stephanie
On 2/27/13 3:03 AM, Davide Rambaldi wrote:
Hi all,
I am working on a library called flowFit, the purpose of thi
Sorry have renamed some variables in the example. The correct example is:
library(flowFit)
parent <- parentFitting(QuahAndParish[[1]], "")
fitting <- proliferationFitting(QuahAndParish[[2]], "",
parent@parentPeakPosition, parent@parentPeakSize)
plot(fitting)
On Feb 27, 2013, at 12:03 PM, D
Hi all,
I am working on a library called flowFit, the purpose of this library is to
analyze the FACS data coming from proliferation tracking dyes study.
The library depends on the flowCore and flowViz bioconductor libraries and use
minpack.lm (levenberg-marquadt algorithm) to fit a set of peak
