Hi,
No ordering was defined until now for GAlignments. Starting with
GAlignments 1.11.7, the elements of a GAlignments object 'x' are
ordered based on the order of the elements in 'granges(x)', that
is, by chromosome, then by strand, then by start, then by end.
Note that I chose a simple orderin
Good day,
When sort is used on a GAlignments object, a stack error is shown, no matter
how small the object is.
> testAlignments
GAlignments object with 3 alignments and 0 metadata columns:
seqnames strand cigarqwidth
start end w
