Re: [Bioc-devel] Error loading rtracklayer

2017-03-29 Thread Shepherd, Lori
bioc-devel@r-project.org Subject: Re: [Bioc-devel] Error loading rtracklayer Thanks for the quick reply. Will i need to bump the version to trigger a rebuild once the changes are made? On 29 Mar 2017 5:17 pm, "Jurat Shayidin" wrote: > Hi: > > This happened to me several times

Re: [Bioc-devel] Error loading rtracklayer

2017-03-29 Thread Malcolm Perry
Thanks for the quick reply. Will i need to bump the version to trigger a rebuild once the changes are made? On 29 Mar 2017 5:17 pm, "Jurat Shayidin" wrote: > Hi: > > This happened to me several times, and I figured out the issue. I tried to > remove `rtracklayer` package completely from `R` home

Re: [Bioc-devel] Error loading rtracklayer

2017-03-29 Thread Shepherd, Lori
Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York 14263 From: Bioc-devel on behalf of Malcolm Perry Sent: Wednesday, March 29, 2017 10:49:48 AM To: bioc-devel@r-project.org Subject: [Bioc-devel] Error loading rtracklayer Hi all, I rece

Re: [Bioc-devel] Error loading rtracklayer

2017-03-29 Thread Jurat Shayidin
Hi: This happened to me several times, and I figured out the issue. I tried to remove `rtracklayer` package completely from `R` home directory; you can try: remove.packages("rtracklayer"). Don't be panic, if this problem still bumps up again, try to reboot your PC (you may need to restart your PC

Re: [Bioc-devel] Error loading rtracklayer

2017-03-29 Thread Michael Lawrence
It looks like things got out of sync with some recent shuffling. A change to Biostrings made it through to the latest builds, but not the change to rtracklayer. There should be a fixed version of rtracklayer available soon, or you could grab it from svn. On Wed, Mar 29, 2017 at 7:49 AM, Malcolm Pe

[Bioc-devel] Error loading rtracklayer

2017-03-29 Thread Malcolm Perry
Hi all, I receive this error when loading rtracklayer in my vignette which is stopping my package from building: Loading required package: IRanges Loading required package: GenomeInfoDb Quitting from lines 39-50 (heatmaps.Rmd) Error: processing vignette 'heatmaps.Rmd' failed with diagnostics: pac