Re: [Bioc-devel] Error in Bioc windows check report

2019-01-03 Thread Benjamin Tremblay
Thank you! I will do as you suggested for the documentation. Still unsure as of yet about what to do about the Rd warnings regarding BiocGenerics. As for motifdb, for now I will just not allow the example to run on windows.. I hope that’s not considered bad form. Thanks, Benjamin > Le 1 janv.

Re: [Bioc-devel] Error in Bioc windows check report

2019-01-01 Thread Martin Morgan
The warnings below can be understood by a careful reading of https://cran.r-project.org/doc/manuals/r-release/R-exts.html#Cross_002dreferences You use \link[pkg]{foo} and the docs say that foo is the name of the html file where you would like to link. DNAStringSet is documented in the html file

[Bioc-devel] Error in Bioc windows check report

2018-12-31 Thread Benjamin Tremblay
Hi, I recently pushed a bug fix to the devel and release branches of my package (universalmotif). The updated package in my GitHub repository (https://github.com/bjmt/universalmotif ) passed all checks with no errors or warnings on linux in travis CI, an