l object. You need to specify a threshold on adjusted p-value.
table(res$padj < 0.1)
You can use subset(res, padj < 0.1) to filter the DataFrame.
>
>>Messaggio originale
>>Da: michaelisaiahl...@gmail.com
>>Data: 10/07/2014 14.46
>>A: "jarod...@libero.it&
hi Jarod,
On Thu, Jul 10, 2014 at 7:59 AM, jarod...@libero.it wrote:
> Hi there!!!
>
> I have did this code:
> SampleTable
> <-data.frame(SampleName=metadata$ID_CLINICO,fileName=metadata$NOME,
> condition=metadata$CONDITION,prim=metadata$CDT)
> ddHTSeq <- DESeqDataSetFromHTSeqCount(sampleTable=S
Hi there!!!
I have did this code:
SampleTable <-data.frame(SampleName=metadata$ID_CLINICO,fileName=metadata$NOME,
condition=metadata$CONDITION,prim=metadata$CDT)
ddHTSeq <- DESeqDataSetFromHTSeqCount(sampleTable=SampleTable,directory="
Count/", design= ~condition) # effetto dello mutazione
ddHTSeq
