Re: [Bioc-devel] Build error for cfTools

2025-04-01 Thread Kern, Lori via Bioc-devel
: Monday, March 31, 2025 2:50 PM To: Kern, Lori Cc: Martin Grigorov ; bioc-devel@r-project.org Subject: Re: [Bioc-devel] Build error for cfTools Hi Lori, Thanks for your quick response. The build error seems to stem from an environment issue with tensorflow=2.10.0. I was hoping the Bioconduc

Re: [Bioc-devel] Build error for cfTools

2025-03-31 Thread RAN HU
prehensive Cancer Center > > Department of Biostatistics & Bioinformatics > > Elm & Carlton Streets > > Buffalo, New York 14263 > -- > *From:* Bioc-devel on behalf of RAN HU > > *Sent:* Monday, March 31, 2025 2:14 PM > *To:* Martin Gr

Re: [Bioc-devel] Build error for cfTools

2025-03-31 Thread Kern, Lori via Bioc-devel
Department of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York 14263 From: Bioc-devel on behalf of RAN HU Sent: Monday, March 31, 2025 2:14 PM To: Martin Grigorov Cc: bioc-devel@r-project.org Subject: Re: [Bioc-devel] Build error for

Re: [Bioc-devel] Build error for cfTools

2025-03-31 Thread RAN HU
Hi, I noticed that there is still a build error on Windows Server for cfTools: https://bioconductor.org/checkResults/devel/bioc-LATEST/cfTools/palomino7-buildsrc.html. Does this prevent Windows users from installing or using the R package? If so, I’d really appreciate the opportunity to work toge

Re: [Bioc-devel] Build error for cfTools

2024-08-16 Thread RAN HU
Hi Martin, Thank you very much for your efforts in solving the problem! I believe kunpeng2 is a relatively new platform, so we did not previously notice the build error. The problem is understandable, and I appreciate that we’ve worked to address it to make most platforms working. Best, Ran On

Re: [Bioc-devel] Build error for cfTools

2024-08-15 Thread Martin Grigorov
Hi Ran, Do you remember how it was solved before (for kunpeng2) ? https://anaconda.org/conda-forge/tensorflow does not provide linux-aarch64 build even for 2.17.0 in the conda-forge channel. Your package uses 2.10.0. The anaconda channel does provide it - https://anaconda.org/anaconda/tensorflow,

[Bioc-devel] Build error for cfTools

2024-08-15 Thread RAN HU
Hi, I am the maintainer of the cfTools package. I found cfTools have build errors on palomino7/8 and kunpeng2 for BioC 3.19 and 3.20, which appear to be caused by an environment issue related to a Python dependency. This has happened before and was solved. Could you help me solve this again? And i