HI Mike,
Thanks so much for taking the time to go through everything so carefully.
It's very much appreciated.
I originally found the issue with BiocCheck by instantiating the bioc-devel
container locally. That one's sorted now so the devel version of ngsReports
builds on r-devel using linux. A f
Hi Stevie,
To follow up on this, BiocCheck is missing from devel because some changes
in R-devel tripped up a few unit tests, and the package hasn't been built
successfully. It looks like Marcel has fixed those issues (
https://code.bioconductor.org/browse/BiocCheck/commits/master) and it
should
Hi Stevie,
It might be helpful to link to the workflow runs so people can see exactly
what you're doing and what's happening. Hopefully I'm looking in the right
place at https://github.com/steveped/ngsReports/actions/runs
I'm not sure about the error message regarding BiocCheck. However there
a
Hi,
I also can't get my github actions bioc-check workflow running for devel,
so I checked the bioc-devel docker image & can't seem to install BiocCheck
on that container. Is this likely to be available for devel soon? Error
from my local installation of the container below:
BiocManager::install
